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CAZyme Gene Cluster: MGYG000002465_13|CGC1

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CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000002465_02254
Tail-specific protease
TC 35268 37337 + 9.B.174.1.2
MGYG000002465_02255
Protease HtpX
TC 37677 38558 + 9.B.1.1.6
MGYG000002465_02256
Riboflavin transporter RibZ
TC 38636 40003 - 2.A.1.3.17
MGYG000002465_02257
Oligogalacturonate lyase
CAZyme 40289 41455 + PL22| PL22_1
MGYG000002465_02258
Pectin degradation repressor protein KdgR
TF 41642 42433 + TrmB
MGYG000002465_02259
N-acetylmuramoyl-L-alanine amidase AmiD
null 42864 43706 + Amidase_2| PG_binding_1
MGYG000002465_02260
L-cystine uptake protein TcyP
TC 43841 45232 - 2.A.23.1.8
MGYG000002465_02261
Inner membrane protein YdjM
null 45485 46033 - YdjM
MGYG000002465_02262
Oligogalacturonate-specific porin KdgM
TC 46336 47034 - 1.B.35.1.1
MGYG000002465_02263
Putative ABC transporter substrate-binding protein YesO
TC 47342 48631 - 3.A.1.1.11
MGYG000002465_02264
Trehalose import ATP-binding protein SugC
TC 48647 49774 - 3.A.1.1.11
MGYG000002465_02265
L-arabinose transport system permease protein AraQ
TC 49788 50708 - 3.A.1.1.11
MGYG000002465_02266
Lactose transport system permease protein LacF
TC 50701 51591 - 3.A.1.1.11
MGYG000002465_02267
Pectate disaccharide-lyase
CAZyme 51632 53299 - PL2| PL2_2
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is pectin

Protein ID eCAMI subfam CAZyme substrate
MGYG000002465_02257 PL22_e0|4.2.2.6 pectin
MGYG000002465_02267 PL2_e0|4.2.2.9 pectin

Substrate predicted by dbCAN-PUL is pectin download this fig


Genomic location